Journal article

Variational algorithms for biclustering models

D Vu, M Aitkin

Computational Statistics and Data Analysis | Published : 2015

Abstract

Biclustering is an important tool in exploratory statistical analysis which can be used to detect latent row and column groups of different response patterns. However, few studies include covariate data directly into their biclustering models to explain these variations. A novel biclustering framework that considers both stochastic block structures and covariate effects is proposed to address this modeling problem. Fast approximation estimation algorithms are also developed to deal with a large number of latent variables and covariate coefficients. These algorithms are derived from the variational generalized expectation-maximization (EM) framework where the goal is to increase, rather than ..

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University of Melbourne Researchers

Grants

Awarded by Australian Research Council


Funding Acknowledgements

This research is supported by ARC Discovery Project DP120102902. We would like to thank Professors Garry Robins and Pip Pattison for motivating us to work on this biclustering problem. We also thank Professor Michael Schweinberger, the Associate Editor, and two referees for their helpful comments on the paper. Experiments in this paper were run on the Edward cluster maintained by Unimelb Research Services HPC staff.